Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN
1F5S Chain:A ((2-211))
EKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK----
General information:
TITO was launched using:
RESULT:
Template:
1F5S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130134 for 1859 contacts (-70.0/contact) +
2D Compatibility (PS) -22702 + (NN) -10262 + (LL) 88
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -186860.0 ( -100.52 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1F5S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F5S-query.scw
PDB file :
Tito_Scwrl_1F5S.pdb
: