Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARPLVEQTADRLLHLILEREYPVGAKLPNEYELAEDLDVGRSTIREAVRSLATRNILEVRQGSGTYISSKKGVSEDPLGFSLIKDTDRLTSDLFELRLLLEPRIAELVAYRITDDQLQLLEKLVGDIEDAVHAGDPKHLLLDVEFHSMLAKYSGNIAMDSLLPVINQSIHLINAN-YTNRQMKSDSLEAHREIIKAIREKNPVAAHDAMLMHIMSVRRSALKA-
1E2X Chain:A ((10-231))
--QSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVAD-HADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQ
General information:
TITO was launched using:
RESULT:
Template:
1E2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92572 for 1645 contacts (-56.3/contact) +
2D Compatibility (PS) -24484 + (NN) -19240 + (LL) 496
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -140450.0 ( -85.38 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1E2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2X-query.scw
PDB file :
Tito_Scwrl_1E2X.pdb
: