Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDENGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADF-RDQMAFIAENGSAAVLFN-RLAYEQHLSREQYLDIIDHLSKSP---YMENNEYVLSGKDGAYILSDANPDYIEFITHYYDNLQKVSHFEDVDDIIFKVTANFTEETVRQAEEWVNQAIPYTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD---- |
| 1NF2 Chain:A ((1-267)) | MYRVFVFDLDGTLLNDNLEIS-EKDRRNIEKLS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVE--PNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPT---YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERISTDCLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120856 for 2141 contacts (-56.4/contact) +
2D Compatibility (PS) -28155 + (NN) -10709 + (LL) 376
1D Compatibility (HY) -14400 + (ID) 3250
Total energy: -176994.0 ( -82.67 by residue)
QMean score : 0.429
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