Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFA-------DKAEIELIEVKD--LPLFN----------KPADKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGIYPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
1T0I Chain:A ((1-185))
MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRLYH---EWHGKPALVVSY--GGHGGSKCNDQLQEVLHGLKMNVI-GGVAVKIPVGTIPLPEDIVPQLSVHNEEILQLLASCI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72648 for 1292 contacts (-56.2/contact) +
2D Compatibility (PS) -18052 + (NN) -6691 + (LL) 2600
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: -104291.0 ( -80.72 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1T0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0I-query.scw
PDB file :
Tito_Scwrl_1T0I.pdb
: