Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTSTLTLDGVSFQLPDGSLLFSDLDETFDTRHTGLVGRNGVGKSLLARLLAGHLQPSSGSVRRQGRVRYLAQQLEPADYPTVADLAGVRPWLEALARIEAGSLDAADYECLGERWDIRQRLADALAAEGLGHLRADTPSERLSGGECMRVALLGAFLDDADFLILDEPSNPLDGPARALLRARLAAWDGGLLLVSHDRELLEGMQRIVELSTLGLRSYGGGYSFYAQSREEAREAAERRLDQRRLERKRQTLAMREQQQRQERCQASGRREGKTANQAKILLGGFRERSEVSAGKLRNAHQAERERLDREVREAAREVEEASPLLLDSPDAELAAQRRIVELKGAVLPH--LRGPLREIDLLLSGPRRLALVGPNGSGKSTLLRLLAGQRAPLAGTCAVT-----------VGAAYLDQRLSVLDHGRGVLEQLLEVNRS------RGESWLRTRLAQLGLPAERLAQPCATLSGGERLKAALALVLYADRPAQLLLLDEPDNHLDLAARQALESMLGQY----RGALLVVSHDPVFLRHLALDGELRATAAGWRLEDR |
| 1Z47 Chain:A ((11-223)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYA-LFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLES-YANRFPHELSGGQQQRVALARALA--PRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVAD-RVLVLHEGNVEQFGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135005 for 1508 contacts (-89.5/contact) +
2D Compatibility (PS) -20410 + (NN) -12179 + (LL) 22968
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -155426.0 ( -103.07 by residue)
QMean score : 0.561
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