Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIHVDSAGTAGWHVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGRGAAELDLFLRRYGS-ERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL
3JVI Chain:A ((5-157))
MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVD-SISRPVVSSDFKNFDYIFAMDNDNYYELLDRCPEQYKQKIFKMVDFCTTIKTTEVPDPY--GEKGFHRVIDILEDACENLIIKLEEG-
General information:
TITO was launched using:
RESULT:
Template:
3JVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70068 for 1257 contacts (-55.7/contact) +
2D Compatibility (PS) -16464 + (NN) -6065 + (LL) 240
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -108857.0 ( -86.60 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3JVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JVI-query.scw
PDB file :
Tito_Scwrl_3JVI.pdb
: