Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKRGALKGNPLKQMVAAVSVGIYQ-GVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE
3DD6 Chain:A ((11-249))
-MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVTAEYAMIPRATEQRTIRESS-GKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQADGGTRTASITGAYVAMVLAFEKLLQAEKVSKIPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSRAQLNELLDAAEQGIFQLIDIQKEALGD
General information:
TITO was launched using:
RESULT:
Template:
3DD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108181 for 1976 contacts (-54.7/contact) +
2D Compatibility (PS) -26232 + (NN) -15517 + (LL) 308
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -180222.0 ( -91.21 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3DD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DD6-query.scw
PDB file :
Tito_Scwrl_3DD6.pdb
: