Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQAVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP |
| 4N37 Chain:D ((5-132)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNDAGNNEHCGNIKAPSLQAWNDAPCDITFLFICKRPYV---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -51462 for 975 contacts (-52.8/contact) +
2D Compatibility (PS) -13971 + (NN) -7895 + (LL) 14392
1D Compatibility (HY) -18000 + (ID) 6250
Total energy: -83186.0 ( -85.32 by residue)
QMean score : 0.173
|
|
|