Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MP-NFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
3WBG Chain:A ((21-152))
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVAS--MTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQ----KWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKE
General information:
TITO was launched using:
RESULT:
Template:
3WBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28572 for 934 contacts (-30.6/contact) +
2D Compatibility (PS) -14537 + (NN) -6215 + (LL) 840
1D Compatibility (HY) -8400 + (ID) 2750
Total energy: -59634.0 ( -63.85 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3WBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WBG-query.scw
PDB file :
Tito_Scwrl_3WBG.pdb
: