Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2IC5 Chain:B ((2-178))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL--------------
General information:
TITO was launched using:
RESULT:
Template:
2IC5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132611 for 1437 contacts (-92.3/contact) +
2D Compatibility (PS) -18967 + (NN) -8412 + (LL) 688
1D Compatibility (HY) -24800 + (ID) 6400
Total energy: -190502.0 ( -132.57 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_2IC5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC5-query.scw
PDB file :
Tito_Scwrl_2IC5.pdb
: