Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASKPQPIAAANWKCNGSESLLVPLIETLNAATFD-HDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAIT-RSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKP-EFVEIIEATK
2BTM Chain:A ((1-249))----RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLEPASFLQLVEAG-


General information:
TITO was launched using:
RESULT:

Template: 2BTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181320 for 2180 contacts (-83.2/contact) +
2D Compatibility (PS) -26834 + (NN) -10373 + (LL) 452
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -241325.0 ( -110.70 by residue)
QMean score : 0.730

(partial model without unconserved sides chains):
PDB file : Tito_2BTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BTM-query.scw
PDB file : Tito_Scwrl_2BTM.pdb: