Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPN-YPFSDEY |
3H7U Chain:A ((26-325)) | -----TFFKLNTGAKFPSVGLGTWQA---SPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS--VGIKP-ENL-L-PVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELAR--VPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSP-GTTWLK---SDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTGSFL-VHETLSPYK--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -177776 for 2533 contacts (-70.2/contact) +
2D Compatibility (PS) -33010 + (NN) -24335 + (LL) 1564
1D Compatibility (HY) -26000 + (ID) 6150
Total energy: -265707.0 ( -104.90 by residue)
QMean score : 0.699
|
|
|