Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKKCTLNFLVLLPFFMILVTAELEESPEDSIQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCNVNTHEKVKTALNLFYLTIIGHGLSIASLLISLGIFFYFKSLSCQRITLHKNLFFSFV-CNSVVTII------HLTAVANNQALVATNPVSCKVSQFIHLYLMGCNYFWM-LCEGIYLHTLIVVAVFAEKQHLMWYYFLGWGFPLIPACIHAIARSLYYNDNCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQAESNLYMKAVRATLILVPLLGIEFVLIPWRPEGKIAEEVYDYIMHILMHFQGLLVSTIFCFFNGEVQAILRRNWNQYKIQFGNSFSNSEALRSASYTVSTISDGPGYSHDCPSEHLNGKSIHDIENVLLKPENLYN----------- |
| 4KBL Chain:A ((101-554)) | ------YRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFN---------------------WDKEKLMERYFDGNMPCQIC---YLNYPNSYFTGLECG-------HKFCMQCWSEYLTTKIMEEGMGQT------ISCPAHGCDI---LVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA----KPVRCKCGRQFC---FNCGENWHDPVKCKWLKKWIKKCIAANTKECPKCHV---TIEKDGGCNHMVCR----NQNC----KAEFCWVCLGPW--EPHGSAWYNCNRYNRSRAALQ-RYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEW-IEVQFLKKAVDVLCQCR---ATLMYTYVFAFYLKK---------NNQSIIFEN---NQADLENATEVLSGYLE-RDISQD-SLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224767 for 2677 contacts (-84.0/contact) +
2D Compatibility (PS) -37916 + (NN) 571 + (LL) 6868
1D Compatibility (HY) -18400 + (ID) 3600
Total energy: -277244.0 ( -103.57 by residue)
QMean score : 0.142
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