Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLPPQLSFGLYVAAFALGFPLNVLAIRGATAHARLRLTPSLVYALNLGCSDLLLTV-SLPLKAVEALASGAWPLPASLCPVFAVAHFFPLYAGGGFLAALSAGRYLGAAFPLGYQAFRRPCYSWGVCAAIWALVLCHLGLVFGLEAPGGWLDHSNTSLGINTPVNGSPVCLEAWDPASAGPARFSLSLLLFFLPLAITAFCYVGCLRALARSGL-----------------------------------------------------------------------------------------------------------------------------------------------------------------THRRKLRAAWVAGGALLTLLLCVGPYNASNVASFLYP---NLGGSWRKLGLITGAWSVVLNPLVTGYLGRGP--GLKTVCAARTQGGKSQK |
| 3EML Chain:A ((22-472)) | -----SVYITVELAIAVLAILGNVLVCWAVWLNSNLQ-NVTNYFVVSLAAADIAVGVLAIPFAITIS---TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ---------SQGCGEGQVACLFEDVVP-MNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157670 for 2102 contacts (-75.0/contact) +
2D Compatibility (PS) -28001 + (NN) -8562 + (LL) 752
1D Compatibility (HY) -16000 + (ID) 2350
Total energy: -211831.0 ( -100.78 by residue)
QMean score : 0.240
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