Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRRITLNSNFMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM---YNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFI-YWLTYNNINFDVVLTKIDKVDREN-LDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR
3IEV Chain:A ((9-180))
------------------------KVGYVAIVGKPNVGKSTLLNNLLGT-KVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLG---HSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHP-ELTEIVPISALKGANLDELVKTILKYLP
General information:
TITO was launched using:
RESULT:
Template:
3IEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104545 for 1316 contacts (-79.4/contact) +
2D Compatibility (PS) -17445 + (NN) -1715 + (LL) 1884
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -130971.0 ( -99.52 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3IEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEV-query.scw
PDB file :
Tito_Scwrl_3IEV.pdb
: