Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVALKFIAIGLSVLGILGAGLGVANIFSTMLSGLARNPESEGKMKIYVYVGAGMVEFTGLLAFVLAMLLMFVA
3U32 Chain:N ((6-74))
--VLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLF--
General information:
TITO was launched using:
RESULT:
Template:
3U32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40665 for 393 contacts (-103.5/contact) +
2D Compatibility (PS) -6924 + (NN) -2603 + (LL) 472
1D Compatibility (HY) 2000 + (ID) 300
Total energy: -48020.0 ( -122.19 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_3U32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U32-query.scw
PDB file :
Tito_Scwrl_3U32.pdb
: