Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNLGVPILDLEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYK------NIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEV--FASTMENK-VDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
3MVN Chain:A ((317-450)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLEVKGVVNNITVYDD-FAHHPTAITATIDALRAKVGQQRILAVLEPR-----KHELATSLQDADSVFIYQP----WQVSEVLANLAQPAISADDVDELVMRIVQ---QAKPNDHILIMSNGAFGGIHQKLLTA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50718 for 843 contacts (-60.2/contact) +
2D Compatibility (PS) -11386 + (NN) -876 + (LL) 26540
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -41940.0 ( -49.75 by residue)
QMean score : 0.458
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