Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDAVNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
3EIY Chain:A ((38-191))
-------------NVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQYKALEKGKWVKVEGWDGIDAAHKEITDGVANFK
General information:
TITO was launched using:
RESULT:
Template:
3EIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95843 for 1157 contacts (-82.8/contact) +
2D Compatibility (PS) -16660 + (NN) -3786 + (LL) 1180
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -134309.0 ( -116.08 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3EIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EIY-query.scw
PDB file :
Tito_Scwrl_3EIY.pdb
: