Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNLESLPKHLAIIMDGNSRWANSQGRVKID-GYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRKN----------IDCVSEDEFEKFLYTKDLPKLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
2VG1 Chain:B ((3-228))------LPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVV---EEICAPANH-WSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSAR------


General information:
TITO was launched using:
RESULT:

Template: 2VG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161379 for 1749 contacts (-92.3/contact) +
2D Compatibility (PS) -22861 + (NN) -3353 + (LL) 840
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -205053.0 ( -117.24 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_2VG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VG1-query.scw
PDB file : Tito_Scwrl_2VG1.pdb: