Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MMCKLEW--DDEINFGKISFLSHSH---IPDRKTGLELAEKY--GIDGV-MIGSGIFHNPFAFEKEPREHTSKE------LLDLLRLHLSLF---NKYEKDEIRQ------FKSLRRFFKIYVRGIRALANFDIN-------
1AQZ Chain:A ((1-149))
ATWTCINQQLEDKRLLYSQAKAESNSHHAPLSDGKTGSSYPHWFTNGYDGNGKLIKG--RTPIKFGKADCDRPPKHSQNGMGKDDHYLLEFPTFPDGHDYKFDSKKPKENPGPARVIYTYPNKVFCGIVAHQRGNQGDLRLCSH
General information:
TITO was launched using:
RESULT:
Template:
1AQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12630 for 682 contacts (-18.5/contact) +
2D Compatibility (PS) -10755 + (NN) 7332 + (LL) 336
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -17367.0 ( -25.46 by residue)
QMean score : 0.069
(partial model without unconserved sides chains):
PDB file :
Tito_1AQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AQZ-query.scw
PDB file :
Tito_Scwrl_1AQZ.pdb
: