Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------MKIIYCITKADNGGAQTHLIQLANHFC-VHHDVYVIVGNHGPMIEQLDARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKI---KPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIG----DGPTLNDCQQQVVQA-GLENDVTFLGNV-----INASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVADNGICMMNNQPETIAKVLEKYLI-DSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
2X6Q Chain:A ((2-414)) | KMYEVKKRKLEDYKSIIGEEEVSKIQEKAEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQP-----AALIEFYEKKSPWLWRCH-----IDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQP-----ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKP----------IITQVSRFDPWKGIFDVIEIYRKVKEKIPG-VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251068 for 2955 contacts (-85.0/contact) +
2D Compatibility (PS) -39149 + (NN) -16418 + (LL) 1660
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -321575.0 ( -108.82 by residue)
QMean score : 0.465
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