Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTPHIKP-MNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGH-FAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
3UT6 Chain:B ((1-232))
--ATPHINAEMGD--FADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSK-VNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESV
General information:
TITO was launched using:
RESULT:
Template:
3UT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170350 for 2053 contacts (-83.0/contact) +
2D Compatibility (PS) -24982 + (NN) -7680 + (LL) 660
1D Compatibility (HY) -25600 + (ID) 6000
Total energy: -233952.0 ( -113.96 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3UT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UT6-query.scw
PDB file :
Tito_Scwrl_3UT6.pdb
: