Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRIGAYLIDAFHRAGVDKIFGVPGDFNLAFLDDIISNPNVDWVGNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPTRAVEQAGKYVHHSLGEGTFDDYRKMFAHITVAQGYIT-PENATTEIPRLINTAIAERR-PVHLHLPIDVAISEIEIPTPFEVTATK---------DTDASTYIELLATKLHQAKQPIIITGHEINSFHLHQELEDFVNQTQIPVA-QLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLILNIGAKLTDSATAGFSYQFNIDDVVML----NHHNIKIDDVTNDEISLPSLLKQLSNI-----SYTNSATFPAYHRPTSPDYTVGTEPLTQQTYFKMMQNFLKPNDVIIADQGTSFFGAYDLALYKNNTFIGQPLWGSIGYTLPATLGSQLADKD----RRNLLLIGDGSLQLTVQAISTMIRQHIKPVLFVINNDGYTVERLIHGMYEPYNEIHMWDYKALPAVFGG-KNVEIHDVESSKDLQDTFN---AINGHPDVMHFVEVKMSVEDAPKKLIDIAKAFSQQNK |
| 1PVD Chain:A ((1-545)) | SEITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSIS--------HHTLGNGDFTVFHRMSANISETTAMITDIATAPAEIDRCIRTTYV-TQRPVYLGLPANLVDLNVP----AKLLQTPIDMSLKPNDAESEKEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVT-PMGKGSISEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSDK-----------TKNIVEFHSD---HMKIRNATFPGVQMKFVLQKLLTNIADAA--KGYKPVAVPARTPANAAVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIHGPKAQYNEIQGWDHLSLLPTFG-AKDYETHRVATTGEWDKLTQDKSFNDN-S-KIRMIEIMLPVFDAP--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270665 for 4366 contacts (-62.0/contact) +
2D Compatibility (PS) -52956 + (NN) -13859 + (LL) 2916
1D Compatibility (HY) -40400 + (ID) 9650
Total energy: -384614.0 ( -88.09 by residue)
QMean score : 0.575
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