Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLCENCQLNEA------ELK-----VKVTSKN-----KTEEKMVCQTCAE----GHHPWN-------QANEQPEYQEHQDNFEEAFVVKQILQHLATKHGINFQEVAFKEEKRCP------SCHMTLKDIA---HVGKFGCANCYATFKDDIIDIVRRVQGG------QFEHVGKTPHSSHKK-------IALKRKIEEKN-EYLKKLIEIQD--FEEAAIV-------------RDEIKALKAESEVQHDDA------- |
| 4RHO Chain:A ((4-259)) | DKIHHHHHHENLYFQGMEIKAMFRDVSLSSRNFSEMLSRESKVVAALAAKSPLMAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASH---AAIWNGNTRPNEGASMSCHVSDEKVLPDRFSTRLGVPDCYAK-SQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17179 for 1125 contacts (15.3/contact) +
2D Compatibility (PS) -19191 + (NN) -2449 + (LL) 488
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -8673.0 ( -7.71 by residue)
QMean score : 0.319
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