Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVT-ILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
4FFS Chain:A ((13-239))
-IGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4FFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132774 for 2016 contacts (-65.9/contact) +
2D Compatibility (PS) -24597 + (NN) -10544 + (LL) 68
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -190297.0 ( -94.39 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4FFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FFS-query.scw
PDB file :
Tito_Scwrl_4FFS.pdb
: