Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNG--------KLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSK------STYWDKNKGDY--SNKLILFEKHFEPVPGIKMQH-SGGHSFGHTIITIESQGDKAVHM-GDIFPTTAHKN-PLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
| 2R2D Chain:A ((1-276)) | ---MGNKLFVLDLGEIRVDENFIIA--NSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEY------FGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93076 for 2104 contacts (-44.2/contact) +
2D Compatibility (PS) -28325 + (NN) -11590 + (LL) 2348
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -139643.0 ( -66.37 by residue)
QMean score : 0.403
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