Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVKTFYNGNTMPQIGLGTF---RVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGT------------------NEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIK--PVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ-----------ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
3UZX Chain:B ((34-328)) | -------DGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIHVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRF--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105790 for 2198 contacts (-48.1/contact) +
2D Compatibility (PS) -27975 + (NN) -10627 + (LL) 496
1D Compatibility (HY) -29200 + (ID) 5550
Total energy: -178646.0 ( -81.28 by residue)
QMean score : 0.447
|
|
|