Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2J9R Chain:A ((25-212))
----NQNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPC-----------------VKAVPVSASKDIFKHITEEMDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRTQRLIDGEPAAFDDPIILVGASESYEPRCRHCHAVPTK-------
General information:
TITO was launched using:
RESULT:
Template:
2J9R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77561 for 1329 contacts (-58.4/contact) +
2D Compatibility (PS) -18691 + (NN) -7572 + (LL) 1400
1D Compatibility (HY) -19200 + (ID) 5350
Total energy: -126974.0 ( -95.54 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2J9R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9R-query.scw
PDB file :
Tito_Scwrl_2J9R.pdb
: