Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGH-FAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
3OOH Chain:O ((2-230))
----TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSK-VNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALE---
General information:
TITO was launched using:
RESULT:
Template:
3OOH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147982 for 2000 contacts (-74.0/contact) +
2D Compatibility (PS) -24029 + (NN) -4728 + (LL) 696
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -206893.0 ( -103.45 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3OOH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOH-query.scw
PDB file :
Tito_Scwrl_3OOH.pdb
: