Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKD-AKAIASYVMAELSSVKKT----------KNPQLIDKGKELFESMGCAGCHGNDGKGLQENQ-VF---------------------AADLTTY---------GTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 1ZZH Chain:A ((150-306)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISFDNFALAVEAFEAT-LITPNSKFDQWLMGADGAMSADEKAGLKLFIDTGCAACHNGINIGGNGYYPFGVVEKPGRFAVTATADDEYVFRAGPLRNIALTAPYFHSGKVWDLREAVSVMA---NSQLG----ATLDDTQVDQITAFLGTLTGEQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8574 for 660 contacts (-13.0/contact) +
2D Compatibility (PS) -11428 + (NN) -8546 + (LL) 12248
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -19800.0 ( -30.00 by residue)
QMean score : 0.321
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