Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEKRLKAIQNKIASWIKEI---ESGFIDALFSKIGPSKMLRSKLMLALLDEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMG-ESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQ----DSHEIIEWTKEKFKQHGIIEETLKIAQVYSKKALEAIK----GENNLILEKLAQDVIYRTF |
| 3AQB Chain:B ((5-325)) | SYKAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYG-IEPAELLSRKYGDKAKYHLSQLQDSNIKDYLEEIHEKMLKRVY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -146632 for 2487 contacts (-59.0/contact) +
2D Compatibility (PS) -33412 + (NN) -21948 + (LL) 204
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -221438.0 ( -89.04 by residue)
QMean score : 0.484
|
|
|