Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTHKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEIL---KYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACI----KINSK--------------------NKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPN----------DLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 2XJ4 Chain:A ((4-269)) | --------------------------TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFENRRAW-----LDNKK------IELPEPLALNLSDNDVALAERPEEEQV-AGFEAAFARAM--AECDFILIDTPGGDSAITRMAHGRADLVVTPMNDSFVDFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQAMDWVVLRNRLATTEARN--RKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQVRPVPVSLQHLAARQELRALMHSLGLSAYSGET------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100756 for 1855 contacts (-54.3/contact) +
2D Compatibility (PS) -24426 + (NN) -9248 + (LL) 3936
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -140144.0 ( -75.55 by residue)
QMean score : 0.478
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