Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM
4BO4 Chain:B ((23-268))
MSLQGKVALVTGASRGIGQAIALELGRLG-AVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNA-------------DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111356 for 1955 contacts (-57.0/contact) +
2D Compatibility (PS) -25297 + (NN) -8029 + (LL) 1388
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -166244.0 ( -85.04 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_4BO4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO4-query.scw
PDB file :
Tito_Scwrl_4BO4.pdb
: