Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWVEDNPNDGSKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSLEIQRLQLEIGGLRGVKFAKLTKASSFEYNE
2WVF Chain:A ((9-142))
--------SIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKAS------
General information:
TITO was launched using:
RESULT:
Template:
2WVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52821 for 817 contacts (-64.7/contact) +
2D Compatibility (PS) -15184 + (NN) -7962 + (LL) 200
1D Compatibility (HY) -18800 + (ID) 6450
Total energy: -101017.0 ( -123.64 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2WVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WVF-query.scw
PDB file :
Tito_Scwrl_2WVF.pdb
: