Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQ--------YDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPA-QNLEVLRRIDEIV-----ALGYEVLLGTSRKSTIGLVLGTTPG-DRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL |
| 2Y5S Chain:B ((24-274)) | ----------LVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYKPAVMRAALAAGADLINDIWG-FRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDV---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117602 for 1898 contacts (-62.0/contact) +
2D Compatibility (PS) -24851 + (NN) -16833 + (LL) 2632
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -175054.0 ( -92.23 by residue)
QMean score : 0.488
|
|
|