Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3WPW Chain:A ((24-168)) | ---------------------------------------------------------------------------------------------------------------------ETLMESIKKALEREIEQGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGI--VRVSGHTDNRPLDSELYRSNWDLSSQRAVSVAQEMEKV-RGFSHQRLRVRGMADTEPLLPNDSDDNRALNRRVEISIMQ---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29347 for 1110 contacts (-26.4/contact) +
2D Compatibility (PS) -15917 + (NN) -9509 + (LL) 9956
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -53867.0 ( -48.53 by residue)
QMean score : 0.509
|
|
|