Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEVTRLISASKQDFEKMNGRDLKRSIFQSEGRVIMAQHLLFASQGLVRGVTNTELLAAFGSDMIMLNTFNLEDEKS-NLGLQ-GLTLEDLKKRV--NIPLGIYLGCPGENKTSENIIYDAAGMLATDEHLLRAKEIGADFIVLGGNPGSGTSI-----------QDIIETTKRARKLLGNDVLIFAGKWEDGIDEKVLGDPLAKQDAKEVIKQLIDAGADVIDLPAPGSRHGISVRMIQELVQFIHLYKPGTLAMTFLNSSVEGADQDTIRLIALMMKETGADIHAIGDGGFSGCTTPENVMQLSISLKGKPYTYFRMASRNR |
| 1VCF Chain:A ((138-288)) | ------------------------------------------------------LRLVEMLEADALAFHVN-PLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHG----------------LSREAALALRDLPLAAVDVAGAGGTSWARVEEWVELCEIGIPTARAILEVREVLPHLPLVASGGVY-------------T---GTDGAKALALGADLLAVARPL----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56016 for 938 contacts (-59.7/contact) +
2D Compatibility (PS) -14706 + (NN) -10178 + (LL) 12236
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -70814.0 ( -75.49 by residue)
QMean score : 0.552
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