Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHYQIAIDQSTSGTKVLLF-KEGKLVDRLDKKHRQLYPKKGWVEHNPIEICQNVRTLIADILT--KHDLITADIERLALTNQRETIVAWDKQTGKPLYNAIVWQCNRTKEICETLKEAGYEKRIKQLTGLKIDSYFSASKMMWLLENISAVRDAASRNQLAFGTMDAWLLFSLTDDSNYFTDRTNASRTLLYDIEKNDWSDELLELFGVKR-AYLPEVKQSAGSFG--------SYQEIPIHSVMADSEAALYGQGCDTFGAVKATLGTGCSVMMQIGENRLPENDAILTTLAWDVAGVN--QFALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGVVLIPGQLGLGAPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMIG-QNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAIEIADNNLQNKRTIAKLYQPSITHTHALEDFQEWEKQVKSSILKIQKVRNFK |
| 2W41 Chain:A ((11-456)) | ------LSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLT-KGNCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHVPDYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGSGVSWLLKN-KLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256733 for 3729 contacts (-68.8/contact) +
2D Compatibility (PS) -45611 + (NN) -14900 + (LL) 4504
1D Compatibility (HY) -39200 + (ID) 7550
Total energy: -359490.0 ( -96.40 by residue)
QMean score : 0.438
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