Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIGIIGAMEEEV-ELLKNSMSSVEEIVIGGAKFYIGEIASKEVVLLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDVTEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFATSENKAVYGLVVTNDSFIMRPDQHEIIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLAAKQSATCIIELLKTI
4BMZ Chain:B ((25-241))
--IGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKE----GVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEEANMSFDAFLEKSAQTSA----------
General information:
TITO was launched using:
RESULT:
Template:
4BMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125784 for 1862 contacts (-67.6/contact) +
2D Compatibility (PS) -23255 + (NN) -10529 + (LL) 1904
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -176464.0 ( -94.77 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4BMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMZ-query.scw
PDB file :
Tito_Scwrl_4BMZ.pdb
: