Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLK--KRISQI-TEETPAEEIAVLVEEVKK-TGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3OYR Chain:A ((27-343)) | -----LVRLAEADMAGVNRLITDRMQS-DVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGA-DNDHFQKLAAAVEFIHTATLLHDDVV---------VAAHLIWGGAQSVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDY-------------------ATLPLLLAIARSGPREAEFWERAIG---TEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164478 for 2338 contacts (-70.3/contact) +
2D Compatibility (PS) -30029 + (NN) -13800 + (LL) 1696
1D Compatibility (HY) -12400 + (ID) 4200
Total energy: -223211.0 ( -95.47 by residue)
QMean score : 0.533
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