Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MNWTIWDKSQKVPYTLLLEA----DPSEKQIAKYLDKSHVFQLMH-DDIVIGIICLFPLNND--QLEIM-NIAVSSDYRNQGIGKK-LLEKAFDYAIHKHFIKIIVKTGNSSIDQLAFYQKNGFRMQHIIPNYFTENYPNQTITENGIVCLDQIILLKEIKS
2PSW Chain:A ((2-156))
SKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPA-----------DAHVLQKNLK-
General information:
TITO was launched using:
RESULT:
Template:
2PSW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63811 for 988 contacts (-64.6/contact) +
2D Compatibility (PS) -15274 + (NN) -4967 + (LL) 880
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -91072.0 ( -92.18 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_2PSW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PSW-query.scw
PDB file :
Tito_Scwrl_2PSW.pdb
: