Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQKTVELVEKEHGTGLAVVANVTKQEDIENMINQAIEAFGTLDILVNNAGIMDNFVPAGELTDELWDKVFAINTTGVMRATREALHIFEEKGQGVIVNIASAGGLFGSRA--GAAYTASKHAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTT-IYAPDEFGQERAMIGMGINPRAGDASEIAKVALFLASDDSSFVNGTVITADAGWTAY
3AWD Chain:C ((10-260))--RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMG---RVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTVW


General information:
TITO was launched using:
RESULT:

Template: 3AWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147094 for 2196 contacts (-67.0/contact) +
2D Compatibility (PS) -27267 + (NN) -10949 + (LL) 20
1D Compatibility (HY) -16800 + (ID) 4600
Total energy: -206690.0 ( -94.12 by residue)
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3AWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AWD-query.scw
PDB file : Tito_Scwrl_3AWD.pdb: