Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRISGTTRLLGLIGTPIDHSKSPIMYNYSFQKAGLDYAYLAFDTPIQKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVN-EDGKLTGHITDGLGFIANLRDASVDVAGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKDAFYDKAKQTVASIKQEVPNCIVHIYDLNDTEKLNAEITTSDILVNATLVGMHPNEHETPISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCK-TVGGLGMLLWQGAEAYKLFTGKDMPVSEVKDLYFN |
| 1NYT Chain:A ((1-267)) | --------METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVS---RAEELAKLFAHTGSIQA---LSMDE---LE--GHEFDLIINATSSGISGDIPA---IPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145996 for 2328 contacts (-62.7/contact) +
2D Compatibility (PS) -28617 + (NN) -8659 + (LL) 1544
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -199278.0 ( -85.60 by residue)
QMean score : 0.591
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