Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTETAEKVEYIIETKDVDLFYG-SKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIKDKKVLD--EIVERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG |
| 3VX4 Chain:A ((44-248)) | ---------------------YGFGRDTLSDINLSIKKGSKVSLVGASGSGKTTLAKLI--VNFYEPN---KGIVRINGNDLK--VIDKTALRRHISYLPQQAYVFSGSIMDNLVLGAK-EGTSQEDIIRACEIAEIRSDIEQMPQGYQTELSDGA-GISGGQKQRIALARALLTQAPVLILDAATSSLDILTEKKIISNLLQMTEK-TIIFVAHRLSISQR-TDEVIVMDQGKIVE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77360 for 1501 contacts (-51.5/contact) +
2D Compatibility (PS) -21680 + (NN) -5977 + (LL) 4060
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -118807.0 ( -79.15 by residue)
QMean score : 0.453
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