Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQFAVDFIEASREEASAILEFLNTVTEETDFILHTVSNQLSLSEMETFIENTLMTKNCICLIAKLKNKVIGLITIISQSDIEIEHVGDLFIAVQKDYWGYGIGHILMEEAIEWASDNDITRRLELSVQGRNERAIHLYQKFGFEIDGLQTRGIKRENGEFLDIYRMSKLID
2Z10 Chain:A ((10-173))
---GRHVRLEPLALAHLPAFLRHYD-PEVY-RFLSRAPVA-PTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPE--PEHAKLELGTMLFKPFWGSPANKEAK-LLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVLRKNRRLPDGAFRDDVVYSVLKE
General information:
TITO was launched using:
RESULT:
Template:
2Z10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111831 for 1193 contacts (-93.7/contact) +
2D Compatibility (PS) -17218 + (NN) -1276 + (LL) 700
1D Compatibility (HY) 800 + (ID) 1400
Total energy: -130225.0 ( -109.16 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_2Z10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z10-query.scw
PDB file :
Tito_Scwrl_2Z10.pdb
: