Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKEDFKEGLPEFASIDVSFISLNLILPALKEILVDGGQVVALIKPQFEAGREQIGKNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE---------------------------------------- |
| 4KRI Chain:C ((1-433)) | ASMPAVERQLIECLHHVIKGAEPQQVGILCPQDDQRKALTEQFGSKTATSFCKEVDSLKNLSNLDALIVNQALDEEINDSEKLDKFITAALRSLRTDGVLILRQDLSKVKEMKKMAMLTDYFDVFRLEEGNGNVGFQFYAVNEVLDSVYVHQNWLDFIWTLMKKPFPVSFRDFLDRTQYTDTGIFAYEWIF---GNNFISPG---------------------GWNQNLAILKRFGPMKTGQRMLDIGVGIGGGARQAASEFGLQVHGVDLSTNMLAVALERVHK-EKDARVTYAVC---DACEYEFEPNSFDYVFSRDCIQHIKDTDKLFS--RIYRALKP---------------GGKVLITMYGVGHGTLSESFKEYVSQRQYY-LKNLEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGWKSKLQYIADDNHNWNFFAAVKPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18887 for 1712 contacts (-11.0/contact) +
2D Compatibility (PS) -24014 + (NN) -2375 + (LL) 2784
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: -47492.0 ( -27.74 by residue)
QMean score : 0.257
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