Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEKYDRSKPHVNIGTIGHVDHGKTTL-------TAAITTVLARRLPTSVNQPKDY---ASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVD-DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIM----ELMSTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEVEIVGIKEDIQKAV---VTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVLAK----PGSINPHTKFKGEVYILSKEEGGR--HTPFFNNYRPQFYFRTTDVTGSIELPAGT------EMVMPGDNVTIEVELIHPIAVE------QGTTFSIREGGRTVGSGIVSEIEA |
3WY9 Chain:A ((5-425)) | ---------KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-------SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQ-IPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156273 for 3085 contacts (-50.7/contact) +
2D Compatibility (PS) -40798 + (NN) -13115 + (LL) 632
1D Compatibility (HY) -31600 + (ID) 7550
Total energy: -248704.0 ( -80.62 by residue)
QMean score : 0.472
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