Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIQAAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPDMAKDDEH--SAHTDRRYASLDDSV--IPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNLVSEY-YLGK
2F90 Chain:B ((5-236))
--KLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGD
General information:
TITO was launched using:
RESULT:
Template:
2F90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75294 for 1887 contacts (-39.9/contact) +
2D Compatibility (PS) -24481 + (NN) -4122 + (LL) 400
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -128097.0 ( -67.88 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2F90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F90-query.scw
PDB file :
Tito_Scwrl_2F90.pdb
: