Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPH-----TRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAK-YGRIVVCEKLQE-YNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQSALLAYQEVYGQLSSP---YMVVGNVHDFNDGLNLSYQLV-KEVSIDGILATSDEVAAGLIKGYEESRKKCP---YIIGQECLLVGQL--LKLPTIDHKSYYLGKLAFKQALAEKI------SQEVLFSEFLSQDN |
| 3K4H Chain:A ((7-283)) | ---------------------------------------------------------TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGGGSD--LLVTRDRLAGMSDALKLADIVLPKEYILHFDFSRESGQQAVEELMGLQQPPTAIMATDDLIGLGVLSALSKKGFVVPKDVSIVSFNNALLSEIASPPLSTVDVNIYQLGYEAAKALVDKVENAESTAKCIIIPHKLLKRQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166838 for 2197 contacts (-75.9/contact) +
2D Compatibility (PS) -27802 + (NN) -12798 + (LL) 4176
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -214662.0 ( -97.71 by residue)
QMean score : 0.532
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