Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEFDTKSYLEKLDAWWRAANYISAAQMYLKDNPLLRRELVENDLKVHPIGHWGTVPGQNFIYAHLNR-AI-------NKYDLDMFYIEGPGHGGQVMVSNSYLDGS-YTELNPNIEQTEDGFKQLCKIFSFPGG-IASHAAP-ETPGSIHEGGELGYALSHATGAILDN-----------------PDVIAATVIGDGEGETGPLMAGWLSNTFINPVNDGAVLPIFYLNGGKIHNPTIFERKTDEELSQFFEGLGWKPIFADVVELSEDHAAAHALFAEKLDQAIQEIKTIQSEARQKPAEEAIQAKFPVLVARIPKGWTGPKAWEGTPIEGGFRAHQVPIPVDAHHMEHVDSLLSWLQSYRPEELFDESGKIVDEIAA------ISPKGDRRMSMNPITNAGI--VKAM------DTA-DWKKFALDINVPGQIMAQDMIEFGKYAADLVDANPDNFRIFGPDETKSNRLQEVFTRTSRQWLGRRKP-----DYDEALSPAGRVIDSQLSEHQAEGFLEGYVLTG-RHGFFASYESFLRVVDSMVTQHFKWLRKSKTHTTWRKNYPALNLIAASTVFQQDHNGYTHQDPGILTHLAEKTPEYIREYLPADTNSLLAVMDKAFKA--EDKINLIVTSKHPRPQFYSIAEAEELVAEGYKVIDWASNVSLNQEPDVVFAAAGTEPNLEALAAISILHKAFPELKIRFVNVLDILKLRHPSQDARGLSDEEFDKVFTTD-KPVIFAFHSYEDMIRDIFFSRHNHNLHTHGYRENGDITTPFDMRVMSELDRFHLAQDAALASLGNEAQAFSDEMNQMVAYHKDYIREHGDDIPEVQNWKWENIK |
| 3RIM Chain:A ((31-696)) | -------------------------------------RVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRTMRHDPSDTHWLGRDR-FVLSAGHSSLTLYIQLYLGGFGLEL---------SDI----ESLRTWGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGV---TSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL--CEDTAARYRAYGWHVQEVE--GGE-NVV----GIEEAIANAQA----------V-------TDRPSFIALRTVIGYPAPNL------MDTGKAHGAALGDD-----EVAAVKKIV-GFDPDKTFQVREDVLTHTRGLVARGKQAHERWQLEFDAW-ARREPERKALLDRLLAQKLPDGWDAD-LPHWEPGSKALATRAASGAVLSALGPKL-PELWGGSADLAGSNNTTIK-------GAD-SFGPPSISTKEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPAVRL----AAL--------MD-IDTIYVWTHDSIGLGEDGPTHQPIEHLSALRAI--PRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQGVPVLDGT--DAEGVARGGYVLSDAGGLQPGEEPDVILIATGSEV-QLAVAAQTLLADN--DILARVVSMPCLEWFEAQ-----PY--EYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTG----EIVSIEHYGESADHKTLFREYGFTAEAVAAAAERALD----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140073 for 5595 contacts (-25.0/contact) +
2D Compatibility (PS) -64996 + (NN) -26470 + (LL) 13080
1D Compatibility (HY) -1200 + (ID) 5150
Total energy: -224809.0 ( -40.18 by residue)
QMean score : 0.331
|
|
|